miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83936927|gb|AM106041.1|AM106041 GGATTCTGAGTTCTCACAGTACGTTATGCCGTACATGAATCTCCATTCGGCGGCCAGGCAGCGGCATCAGGTGCGCGTAA
TCACCATCGGCTTCTTCCGGATGCTGAAGAGTATGCAGACGTACAAGGTGATGAAGACAAAGCCCGAATATGCCGCCCTT
GTGGACTTTATGCTGTGGCTGGAGGAGCAGAAGGCACGCAATCCCGACTCCAAGGGCATCATTATGCTCTACCATGAGCA
ACGGAAATTTGTGCCCTACATGCTCCTGGAGGCGCTCAAAAAGTACGACATGCTCCCACGCTTCAAAACCTCCGTTGTAG
GCTTCACAAATGTCTACCCATTGGCTGAGAAGGAATGTGGGGTGACTTTGAAGTATTTCACCCTGAAGGAACTCAAGAAG
GTCATCTTGCAATGCGATGAAGATGACAGGAATGAGTTTGAGGGTAGTGCCAAGGTACGCTCAAAGATTGCCTATGATGT
GTCGAAGGTGTTGGCAAATAAACCATCTGCAGCTACTGTTGAGGTGAAGAAGGAAGATGTTGCTGAAGCTGCTGCTGCTG
CTGCTGCGGTGCAGCAACCGGAAGCAGCTGTTGAGGAGAATAGTGTGCAAGAGCAGGAAGGTCAGGAGGCGAAGCCAGAG
CAACAGGAGCAGCAGGAGCAACAAGTTGAGAGAGATGGAGAGGCTAATAAGGTGGAGGAGGCTGCTCAGGAAGCAGTTGA
AACACCTTCTGTGACTGAGACGCAAGAGGAGAAGAAACCAGCTGTTGTGCCCGTTGTGAAGGAGGCAAACACGGAGAAGG
AGCGAACAGCTGTCTTCCATCGTGTTATCACGGGCATGGCGACGACAATTGACGAGGATCTCNCAGAATTGGGTGGGCAG
CAAAACATTCTGGACAGGCAGAATTCTCTGAGAACATTTTTGTCAACTACTTCAGACGACTCTCTACCTCGTGGGAAGGG
GGTCCCCTTTTCAATTGTCTTGCGGAACAGGCCTTCAACATGACAAGCTCCAGGAATTTTGGGGAAAGAAAAACCCGATG
GCTTTCAGGGGCCCCTTTGCGGGCTGCGGGAATTCAGGAAAAAGAAAAGAAGGGCCTAACAAATCTCCTGGTTGGTCTTT
TGCCCCCAAGAAACACCCATTTAGCCCGTTCCCCCAAACACAAAAAAAGGCCTTCCCGCGAAAAAAACTCTAGGATTTCC
CCGGGGAAGCGAAATTTCCAAGGGAGAAAAACAACTTCCCCCCCCCCATGGGGAGAAAACTTTGG




Most similar to sp|Q24747|EXU_DROVI

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q24747|EXU_DROVI Maternal protein exuperantia OS=Drosophila
           virilis GN=exu PE=3 SV=1
          Length = 486

 Score =  183 bits (465), Expect = 2e-45
 Identities = 93/193 (48%), Positives = 132/193 (68%), Gaps = 27/193 (13%)
 Frame = +2

Query: 11  FSQYVMPYMNLHSAARQRHQVRVITIGFFRMLKSMQTYKVMKTKPEYAALVDFMLWLEEQ 190
           F QY+MPYMNL+ AARQRHQVRVI+IGFFRMLKSMQTYK++K+K E AAL DF+ WL++ 
Sbjct: 65  FEQYIMPYMNLNPAARQRHQVRVISIGFFRMLKSMQTYKIIKSKSEVAALKDFLDWLDQL 124

Query: 191 KARNPDSKGIIMLYHEQRKFVPYMLLEALKKYDMLPRFKTSVVGFTNVYPLAEKECGVTL 370
           K++NP++ GI++LYHE+RKF+PYM+L++L KY ML RF  +V  F N + LA+   G T 
Sbjct: 125 KSKNPNTDGIVLLYHEERKFIPYMILQSLVKYGMLDRFTKTVKSFVNSFNLAKSSIGDT- 183

Query: 371 KYFTLKELKKVILQCDED---------------------------DRNEFEGSAKVRSKI 469
           K+++L+ L K++ +  ED                           +R+EF+GSA VR+K+
Sbjct: 184 KHYSLRNLSKILSKAKEDNARVDNDNEADSNSSSADKHVKNGLQKERDEFDGSASVRAKL 243

Query: 470 AYDVSKVLANKPS 508
            ++V+  L+N  S
Sbjct: 244 TFNVALQLSNLDS 256